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山东大学学报(医学版) ›› 2011, Vol. 49 ›› Issue (11): 44-.

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应用抑制消减杂交技术筛选颞叶癫痫的相关基因

李璐1,刘玲2,刘晓丽2,刘军莉2,赵敬杰2,尚伟1   

  1. 山东大学第二医院 1. 神经内科;  2.分子生物学实验室, 济南 250033
  • 收稿日期:2011-05-12 出版日期:2011-11-10 发布日期:2011-11-10
  • 通讯作者: 尚伟(1967- ),男,主任医师,硕导,主要从事癫痫相关的研究。E-mail:wshang85@yahoo.com.cn
  • 作者简介:李璐(1984- ),女,硕士研究生,主要从事癫痫方面的研究。
  • 基金资助:

    山东省中青年科学家科研奖励基金资助项目(2006BS03004),山东省自然科学基金资助项目(Y2007C093)

Application of suppression subtractive hybridization to screen for temporal lobe epilepsy-related genes

LI Lu1, LIU Ling2, LIU Xiao-li2, LIU Jun-li2, ZHAO Jing-jie2,, SHANG Wei1   

  1. 1. Department of Neurology;  2. Laboratory of Molecular Biology, The Second Hospital of
     Shandong University, Jinan 250033, China
  • Received:2011-05-12 Online:2011-11-10 Published:2011-11-10

摘要:

目的   构建颞叶癫痫大鼠海马组织差异表达基因的消减cDNA 文库,筛选颞叶癫痫的差异基因。方法   采用抑制消减杂交方法,以正常大鼠和癫痫大鼠的海马组织作为对比材料,分离组织中差异表达基因的cDNA 片段,将其与T载体进行T/A连接构建文库,将连接产物转化大肠杆菌进行文库扩增后,随机挑取100个白色克隆,用菌落PCR法筛选差异基因克隆,并进行测序分析。结果   获得14个在癫痫大鼠海马组织中有差异表达,并与大鼠的已知基因片段高度同源的基因。 结论   抑制消减杂交技术是一种高效的筛选差异表达基因的方法,颞叶癫痫大鼠海马组织中存在许多差异表达基因,为深入研究癫痫发病的分子机制提供重要线索。

关键词: 抑制消减杂交技术;癫痫,颞叶;海马;基因表达

Abstract:

Objective   To construct a subtracted cDNA library of differentially expressed genes in the hippocampus of rats with temporal lobe epilepsy, and to screen for differentially expressed genes related to temporal lobe epilepsy. Methods   Suppression subtractive hybridization (SSH) was used for isolating cDNA fragments of differentially expressed genes in the hippocampus of temporal lobe epilepti rats, and normal hippocampus tissues were controls. The products of SSH were directly inserted into the T/A cloning vector to set up the subtractive library which was amplified through E.coli transformation. One hundred positive bacterium clones were randomly picked and screened the colony polymerase chain reaction (PCR) method.  Results   Fourteen differentially expressed genes were obtained from the hippocampus of temporal lobe epileptic rats by sequencing and using Basic Local Alignment Search Tool (BLAST), and they were highly homologous with the known gene fragments in rats. Conclusion   SSH is an effective method for screening for differentially expressed genes. Many differentially expressed genes exist in the hippocampus of rats with temporal lobe epilepsy. The results of this study provide an important clue for further exploring the molecular mechanism of temporal lobe epilepsy.

Key words: Suppression subtractive hybridization; Epilepsy, temporal lobe; Hippocampus; Gene expression

中图分类号: 

  • R742.1
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